Transforming XML file: NeuroMLFiles/Examples/ChannelML/CaPool.xml using XSL file: NeuroMLFiles/Schemata/v1.8.1/Level3/NeuroML_Level3_v1.8.1_HTML.xsl

View original file before transform

Converting the file: CaPool.xml

General notes
Notes present in ChannelML file
A channel from Maex, R and De Schutter, E. Synchronization of Golgi and Granule Cell Firing in a Detailed Network Model of the Cerebellar Granule Cell Layer.

Unit system of ChannelML file
This can be either SI Units or Physiological Units (milliseconds, centimeters, millivolts, etc.)
SI Units

Ions involved in this channel:

Ion: ca
One of the ions involved in this channel. Note that the reversal potential used here is a typical value, it should be determined for each cell type based on ionic concentrations
Charge: 2
Role of ion in process: SignallingSubstance

Signifies that the ion is involved in a process which alters its concentration

Ion concentration: Generic_CaPool

NameGeneric_CaPool
Status
Status of element in file
Stable
Comment: This ChannelML file has been updated to reflect the preferred form of elements/attributes which will be required from v2.0. See info on Version 2 Requirements.
Contributor: Padraig Gleeson
Description
As described in ChannelML file
An expontially decaying pool of calcium
Referenced publicationMaex, R and De Schutter, E. Synchronization of Golgi and Granule Cell Firing in a Detailed Network Model of the cerebellar Granule Cell Layer. J Neurophysiol, Nov 1998; 80: 2521 - 2537 Pubmed
Ion species
The type of ion whose concentration will be altered
ca

Dynamic model: decaying_pool_model

The model underlying the mechanism altering the ion concentration

Resting concentration
The base level concentration of the ion
7.55e-5 mole m-3 (or mM)
Decay Constant
The rate of decay (tau) of the concentration back to resting level
1e-2 s
Shell Thickness
The thickness of a shell under the cell membrane where all the change in ion concentration is assumed to take place
8.4e-8 m


Time to transform file: 0.148 secs